diff options
Diffstat (limited to 'gnu/packages/mpi.scm')
| -rw-r--r-- | gnu/packages/mpi.scm | 23 |
1 files changed, 13 insertions, 10 deletions
diff --git a/gnu/packages/mpi.scm b/gnu/packages/mpi.scm index 93157e2692..517f912417 100644 --- a/gnu/packages/mpi.scm +++ b/gnu/packages/mpi.scm @@ -42,7 +42,7 @@ (define-public hwloc (package (name "hwloc") - (version "1.11.7") + (version "1.11.8") (source (origin (method url-fetch) (uri (string-append "https://www.open-mpi.org/software/hwloc/v" @@ -50,7 +50,7 @@ "/downloads/hwloc-" version ".tar.bz2")) (sha256 (base32 - "0acph1mf7588hfx8ds26ncr6nw5fd9x92adm11fwin7f93i10sdb")))) + "0karxv4r1r8sa7ki5aamlxdvyvz0bvzq4gdhq0yi5nc4a0k11vzc")))) (build-system gnu-build-system) (outputs '("out" ;'lstopo' & co., depends on Cairo, libx11, etc. "lib" ;small closure @@ -132,9 +132,7 @@ bind processes, and much more.") `(("pkg-config" ,pkg-config) ("perl" ,perl))) (arguments - `(#:configure-flags `("--enable-builtin-atomics" - - "--enable-mpi-ext=affinity" ;cr doesn't work + `(#:configure-flags `("--enable-mpi-ext=affinity" ;cr doesn't work "--enable-memchecker" "--with-sge" @@ -148,16 +146,21 @@ bind processes, and much more.") (assoc-ref %build-inputs "hwloc"))) #:phases (modify-phases %standard-phases (add-before 'build 'remove-absolute - ;; Remove compiler absolute file names (OPAL_FC_ABSOLUTE - ;; etc.) to reduce the closure size. See - ;; <https://lists.gnu.org/archive/html/guix-devel/2017-07/msg00388.html> - ;; and - ;; <https://www.mail-archive.com/users@lists.open-mpi.org//msg31397.html>. (lambda _ + ;; Remove compiler absolute file names (OPAL_FC_ABSOLUTE + ;; etc.) to reduce the closure size. See + ;; <https://lists.gnu.org/archive/html/guix-devel/2017-07/msg00388.html> + ;; and + ;; <https://www.mail-archive.com/users@lists.open-mpi.org//msg31397.html>. (substitute* '("orte/tools/orte-info/param.c" "oshmem/tools/oshmem_info/param.c" "ompi/tools/ompi_info/param.c") (("_ABSOLUTE") "")) + ;; Avoid valgrind (which pulls in gdb etc.). + (substitute* + '("./ompi/mca/io/romio/src/io_romio_component.c") + (("MCA_io_romio_COMPLETE_CONFIGURE_FLAGS") + "\"[elided to reduce closure]\"")) #t)) (add-before 'build 'scrub-timestamps ;reproducibility (lambda _ |