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authorRicardo Wurmus <rekado@elephly.net>2019-05-04 10:26:31 +0200
committerRicardo Wurmus <rekado@elephly.net>2019-05-06 00:14:27 +0200
commit6490cd31cc5b7ef6607ec28a05e9cd50793c0c50 (patch)
tree936000845ef576a7380d0c974ef0c8a83bc3210d /guix
parent123e424e95ccbc1d6e436202b8f3992b7125f031 (diff)
downloadgnu-guix-6490cd31cc5b7ef6607ec28a05e9cd50793c0c50.tar
gnu-guix-6490cd31cc5b7ef6607ec28a05e9cd50793c0c50.tar.gz
guix: Update to Bioconductor 3.9.
* guix/build-system/r.scm (bioconductor-uri): Use 3.9 archive URL. * guix/import/cran.scm (%bioconductor-version): Update to 3.9.
Diffstat (limited to 'guix')
-rw-r--r--guix/build-system/r.scm2
-rw-r--r--guix/import/cran.scm4
2 files changed, 3 insertions, 3 deletions
diff --git a/guix/build-system/r.scm b/guix/build-system/r.scm
index 664515d0ee..e7214155be 100644
--- a/guix/build-system/r.scm
+++ b/guix/build-system/r.scm
@@ -53,7 +53,7 @@ release corresponding to NAME and VERSION."
(list (string-append "https://bioconductor.org/packages/release/bioc/src/contrib/"
name "_" version ".tar.gz")
;; TODO: use %bioconductor-version from (guix import cran)
- (string-append "https://bioconductor.org/packages/3.8/bioc/src/contrib/Archive/"
+ (string-append "https://bioconductor.org/packages/3.9/bioc/src/contrib/Archive/"
name "_" version ".tar.gz")))
(define %r-build-system-modules
diff --git a/guix/import/cran.scm b/guix/import/cran.scm
index b287be6941..f08ff61990 100644
--- a/guix/import/cran.scm
+++ b/guix/import/cran.scm
@@ -128,9 +128,9 @@ package definition."
(define %cran-url "https://cran.r-project.org/web/packages/")
(define %bioconductor-url "https://bioconductor.org/packages/")
-;; The latest Bioconductor release is 3.8. Bioconductor packages should be
+;; The latest Bioconductor release is 3.9. Bioconductor packages should be
;; updated together.
-(define %bioconductor-version "3.8")
+(define %bioconductor-version "3.9")
(define %bioconductor-packages-list-url
(string-append "https://bioconductor.org/packages/"