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| author | Ricardo Wurmus <rekado@elephly.net> | 2018-06-02 13:35:20 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2018-06-02 13:39:13 +0200 |
| commit | d7e3299987b2b08f06b545b3032f52f0a3421bc1 (patch) | |
| tree | bcbbd156625c7985b2ba081fcce8772085e09bbe /gnu | |
| parent | 8ec56b2956697bedf9d85aa1cb03205639ada323 (diff) | |
| download | gnu-guix-d7e3299987b2b08f06b545b3032f52f0a3421bc1.tar gnu-guix-d7e3299987b2b08f06b545b3032f52f0a3421bc1.tar.gz | |
gnu: r-scran: Update to 1.8.2.
* gnu/packages/bioinformatics.scm (r-scran): Update to 1.8.2.
[propagated-inputs]: Remove r-zoo; add r-delayedmatrixstats and r-delayedarray.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 9 |
1 files changed, 5 insertions, 4 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index fb4a8c85c8..e9477501b3 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -10888,19 +10888,21 @@ quality control.") (define-public r-scran (package (name "r-scran") - (version "1.6.9") + (version "1.8.2") (source (origin (method url-fetch) (uri (bioconductor-uri "scran" version)) (sha256 (base32 - "0cs64cnf0xjcgmawr210y99j3gxs6aqgh8081n9827kkqnx2y5dm")))) + "0nbn5x75gf9d0p18w7vpkbv30cpdqvp5bz8xvila0h7jla7xdyih")))) (build-system r-build-system) (propagated-inputs `(("r-beachmat" ,r-beachmat) ("r-biocgenerics" ,r-biocgenerics) ("r-biocparallel" ,r-biocparallel) + ("r-delayedarray" ,r-delayedarray) + ("r-delayedmatrixstats" ,r-delayedmatrixstats) ("r-dt" ,r-dt) ("r-dynamictreecut" ,r-dynamictreecut) ("r-edger" ,r-edger) @@ -10917,8 +10919,7 @@ quality control.") ("r-singlecellexperiment" ,r-singlecellexperiment) ("r-statmod" ,r-statmod) ("r-summarizedexperiment" ,r-summarizedexperiment) - ("r-viridis" ,r-viridis) - ("r-zoo" ,r-zoo))) + ("r-viridis" ,r-viridis))) (home-page "https://bioconductor.org/packages/scran") (synopsis "Methods for single-cell RNA-Seq data analysis") (description "This package implements a variety of low-level analyses of |