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| author | Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> | 2015-12-18 14:06:28 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> | 2016-01-07 17:18:16 +0100 |
| commit | 8b7bce740d507d544b6634b0f60be9450b36c5fc (patch) | |
| tree | 8a806d6fa172c0c9d23e96c4db47c88ea576c347 /gnu/packages | |
| parent | 555e3399dc1f213a0834a0dfd94a585f72f57449 (diff) | |
| download | gnu-guix-8b7bce740d507d544b6634b0f60be9450b36c5fc.tar gnu-guix-8b7bce740d507d544b6634b0f60be9450b36c5fc.tar.gz | |
gnu: Add AnnotationDbi.
* gnu/packages/bioinformatics.scm (r-annotationdbi): New variable.
Diffstat (limited to 'gnu/packages')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 27 |
1 files changed, 27 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 54fc051037..9577f714ff 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -3488,6 +3488,33 @@ manipulating genomic intervals and variables defined along a genome.") on Bioconductor or which replace R functions.") (license license:artistic2.0))) +(define-public r-annotationdbi + (package + (name "r-annotationdbi") + (version "1.32.2") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "AnnotationDbi" version)) + (sha256 + (base32 + "08ncdjvq0l44kqyiv32kn9wnbw1xgfb6qjfzfbjpqrcfp1jygz9j")))) + (properties + `((upstream-name . "AnnotationDbi"))) + (build-system r-build-system) + (propagated-inputs + `(("r-biobase" ,r-biobase) + ("r-biocgenerics" ,r-biocgenerics) + ("r-dbi" ,r-dbi) + ("r-iranges" ,r-iranges) + ("r-rsqlite" ,r-rsqlite) + ("r-s4vectors" ,r-s4vectors))) + (home-page "http://bioconductor.org/packages/AnnotationDbi") + (synopsis "Annotation database interface") + (description + "This package provides user interface and database connection code for +annotation data packages using SQLite data storage.") + (license license:artistic2.0))) + (define-public r-qtl (package (name "r-qtl") |