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author | Efraim Flashner <efraim@flashner.co.il> | 2017-03-23 14:53:33 +0200 |
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committer | Efraim Flashner <efraim@flashner.co.il> | 2017-03-23 14:53:33 +0200 |
commit | 0371b345e8bffb0770b1a02ddd1c248f90566e04 (patch) | |
tree | ddfd9cc4e32193945f4891c3f77e2b8271c4a5ae /gnu/packages | |
parent | 8be563a5a39205d55fd39399e29a9272305b34c6 (diff) | |
parent | c53af0016e283ef642ac43ccc2ee5d650f06a888 (diff) | |
download | gnu-guix-0371b345e8bffb0770b1a02ddd1c248f90566e04.tar gnu-guix-0371b345e8bffb0770b1a02ddd1c248f90566e04.tar.gz |
Merge remote-tracking branch 'origin/master' into core-updates
Diffstat (limited to 'gnu/packages')
-rw-r--r-- | gnu/packages/autotools.scm | 4 | ||||
-rw-r--r-- | gnu/packages/bioinformatics.scm | 4 | ||||
-rw-r--r-- | gnu/packages/compression.scm | 16 | ||||
-rw-r--r-- | gnu/packages/embedded.scm | 1 | ||||
-rw-r--r-- | gnu/packages/guile.scm | 3 | ||||
-rw-r--r-- | gnu/packages/haskell.scm | 22 | ||||
-rw-r--r-- | gnu/packages/idris.scm | 5 | ||||
-rw-r--r-- | gnu/packages/libffcall.scm | 1 | ||||
-rw-r--r-- | gnu/packages/mail.scm | 4 | ||||
-rw-r--r-- | gnu/packages/package-management.scm | 6 | ||||
-rw-r--r-- | gnu/packages/patches/chicken-CVE-2016-6830+CVE-2016-6831.patch | 81 | ||||
-rw-r--r-- | gnu/packages/patches/chicken-CVE-2017-6949.patch | 132 | ||||
-rw-r--r-- | gnu/packages/perl-web.scm | 4 | ||||
-rw-r--r-- | gnu/packages/python.scm | 36 | ||||
-rw-r--r-- | gnu/packages/rust.scm | 20 | ||||
-rw-r--r-- | gnu/packages/scheme.scm | 16 | ||||
-rw-r--r-- | gnu/packages/video.scm | 4 |
17 files changed, 217 insertions, 142 deletions
diff --git a/gnu/packages/autotools.scm b/gnu/packages/autotools.scm index 442c87c1f1..e933973489 100644 --- a/gnu/packages/autotools.scm +++ b/gnu/packages/autotools.scm @@ -165,7 +165,7 @@ exec ~a --no-auto-compile \"$0\" \"$@\" (define-public autoconf-archive (package (name "autoconf-archive") - (version "2016.09.16") + (version "2017.03.21") (source (origin (method url-fetch) @@ -173,7 +173,7 @@ exec ~a --no-auto-compile \"$0\" \"$@\" version ".tar.xz")) (sha256 (base32 - "10mxz9hfnfz66m1l9s28sbyfb9a04akz92wkyv9blhpq6p9fzwp8")))) + "0rfpapadka2023qhy8294ca5awxpb8d4904js6kv7piby5ax8siq")))) (build-system gnu-build-system) (home-page "https://www.gnu.org/software/autoconf-archive") (synopsis "Collection of freely reusable Autoconf macros") diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 97380fc032..232c7db838 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -5051,7 +5051,7 @@ application of SortMeRNA is filtering rRNA from metatranscriptomic data.") (define-public star (package (name "star") - (version "2.5.2b") + (version "2.5.3a") (source (origin (method url-fetch) (uri (string-append "https://github.com/alexdobin/STAR/archive/" @@ -5059,7 +5059,7 @@ application of SortMeRNA is filtering rRNA from metatranscriptomic data.") (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "1na6np880r1zaamiy00hy8bid5anpy0kgf63587v2yl080krk2zq")) + "013wirlz8lllgjyagl48l75n1isxyabqb3sj7qlsl0x1rmvqw99a")) (modules '((guix build utils))) (snippet '(begin diff --git a/gnu/packages/compression.scm b/gnu/packages/compression.scm index 576a70af75..6f5f584822 100644 --- a/gnu/packages/compression.scm +++ b/gnu/packages/compression.scm @@ -596,7 +596,7 @@ decompression of some loosely related file formats used by Microsoft.") (define-public perl-compress-raw-bzip2 (package (name "perl-compress-raw-bzip2") - (version "2.068") + (version "2.074") (source (origin (method url-fetch) @@ -604,7 +604,7 @@ decompression of some loosely related file formats used by Microsoft.") "Compress-Raw-Bzip2-" version ".tar.gz")) (sha256 (base32 - "16hl58xppckldz05zdyid1l5gpaykzwvkq682h3rc3nilbhgjqqg")))) + "0b5jwqf15zr787acnx8sfyy2zavdd7gfkd98n1dgy8fs6r8yb8a4")))) (build-system perl-build-system) ;; TODO: Use our bzip2 package. (home-page "http://search.cpan.org/dist/Compress-Raw-Bzip2") @@ -616,7 +616,7 @@ compression library.") (define-public perl-compress-raw-zlib (package (name "perl-compress-raw-zlib") - (version "2.068") + (version "2.074") (source (origin (method url-fetch) @@ -624,7 +624,7 @@ compression library.") "Compress-Raw-Zlib-" version ".tar.gz")) (sha256 (base32 - "06q7n87g26nn5gv4z2p31ca32f6zk124hqxc25rfgkjd3qi5798i")))) + "08bpx9v6i40n54rdcj6invlj294z20amrl8wvwf9b83aldwdwsd3")))) (build-system perl-build-system) (inputs `(("zlib" ,zlib))) @@ -651,7 +651,7 @@ compression library.") (define-public perl-io-compress (package (name "perl-io-compress") - (version "2.068") + (version "2.074") (source (origin (method url-fetch) @@ -659,11 +659,11 @@ compression library.") "IO-Compress-" version ".tar.gz")) (sha256 (base32 - "0dy0apjp7j9dfkzfjspjd3z9gh26srx5vac72g59bkkz1jf8s1gs")))) + "1wlpy2026djfmq0bjync531yq6s695jf7bcnpvjphrasi776igdl")))) (build-system perl-build-system) (propagated-inputs - `(("perl-compress-raw-zlib" ,perl-compress-raw-zlib) ; >=2.068 - ("perl-compress-raw-bzip2" ,perl-compress-raw-bzip2))) ; >=2.068 + `(("perl-compress-raw-zlib" ,perl-compress-raw-zlib) ; >=2.074 + ("perl-compress-raw-bzip2" ,perl-compress-raw-bzip2))) ; >=2.074 (home-page "http://search.cpan.org/dist/IO-Compress") (synopsis "IO Interface to compressed files/buffers") (description "IO-Compress provides a Perl interface to allow reading and diff --git a/gnu/packages/embedded.scm b/gnu/packages/embedded.scm index 222278009d..0e86478bd3 100644 --- a/gnu/packages/embedded.scm +++ b/gnu/packages/embedded.scm @@ -732,6 +732,7 @@ simulator.") (uri (git-reference (url "https://github.com/puppeh/binutils-vc4.git") (commit commit))) + (file-name (string-append name "-" version "-checkout")) (sha256 (base32 "1kdrz6fki55lm15rwwamn74fnqpy0zlafsida2zymk76n3656c63")))) diff --git a/gnu/packages/guile.scm b/gnu/packages/guile.scm index b621d8274d..0e75e026b5 100644 --- a/gnu/packages/guile.scm +++ b/gnu/packages/guile.scm @@ -247,6 +247,9 @@ without requiring the source code to be rewritten.") (files '("lib/guile/2.2/site-ccache" "share/guile/site/2.2"))))))) +(define-public guile-next + (deprecated-package "guile-next" guile-2.2)) + (define (guile-variant-package-name prefix) (lambda (name) "Return NAME with PREFIX instead of \"guile-\", when applicable." diff --git a/gnu/packages/haskell.scm b/gnu/packages/haskell.scm index 2415881e8e..d48983a81a 100644 --- a/gnu/packages/haskell.scm +++ b/gnu/packages/haskell.scm @@ -9,6 +9,7 @@ ;;; Copyright © 2015, 2016, 2017 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2016, 2017 David Craven <david@craven.ch> ;;; Copyright © 2017 Danny Milosavljevic <dannym@scratchpost.org> +;;; Copyright © 2017 Peter Mikkelsen <petermikkelsen10@gmail.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -562,6 +563,27 @@ package.") package.") (license license:bsd-3))) +(define-public ghc-code-page + (package + (name "ghc-code-page") + (version "0.1.3") + (source + (origin + (method url-fetch) + (uri (string-append + "https://hackage.haskell.org/package/code-page/code-page-" + version ".tar.gz")) + (sha256 + (base32 + "1491frk4jx6dlhifky9dvcxbsbcfssrz979a5hp5zn061rh8cp76")))) + (build-system haskell-build-system) + (home-page "https://github.com/RyanGlScott/code-page") + (synopsis "Windows code page library for Haskell") + (description "A cross-platform library with functions for adjusting +code pages on Windows. On all other operating systems, the library does +nothing.") + (license license:bsd-3))) + (define-public ghc-haddock-library (package (name "ghc-haddock-library") diff --git a/gnu/packages/idris.scm b/gnu/packages/idris.scm index 02198a5a7d..2b7f4cc9dd 100644 --- a/gnu/packages/idris.scm +++ b/gnu/packages/idris.scm @@ -31,7 +31,7 @@ (define-public idris (package (name "idris") - (version "0.99") + (version "0.99.1") (source (origin (method url-fetch) (uri (string-append @@ -39,7 +39,7 @@ "idris-" version "/idris-" version ".tar.gz")) (sha256 (base32 - "1sd4vy5rx0mp32xj99qijhknkgw4d2rxvz6wiy3pym6kaqmc497i")))) + "12kw452arnl5ldip2x749j5np3l40bv7asqdv9w0f60j45hii40r")))) (build-system haskell-build-system) (inputs `(("gmp" ,gmp) @@ -53,6 +53,7 @@ ("ghc-blaze-html" ,ghc-blaze-html) ("ghc-blaze-markup" ,ghc-blaze-markup) ("ghc-cheapskate" ,ghc-cheapskate) + ("ghc-code-page" ,ghc-code-page) ("ghc-fingertree" ,ghc-fingertree) ("ghc-fsnotify" ,ghc-fsnotify) ("ghc-ieee754" ,ghc-ieee754) diff --git a/gnu/packages/libffcall.scm b/gnu/packages/libffcall.scm index 5e12c6b160..6ff40c8a10 100644 --- a/gnu/packages/libffcall.scm +++ b/gnu/packages/libffcall.scm @@ -36,6 +36,7 @@ ":pserver:anonymous@cvs.savannah.gnu.org:/sources/libffcall") (module "ffcall") (revision "2015-01-15"))) + (file-name (string-append name "-" version "-checkout")) (sha256 (base32 "1lwdskc2w4rr98x9flr2726lmj4190l16r0izg7gqxy50801wwgd")))) diff --git a/gnu/packages/mail.scm b/gnu/packages/mail.scm index 369fb69d9b..53a8632947 100644 --- a/gnu/packages/mail.scm +++ b/gnu/packages/mail.scm @@ -1080,7 +1080,7 @@ facilities for checking incoming mail.") (define-public dovecot (package (name "dovecot") - (version "2.2.27") + (version "2.2.28") (source (origin (method url-fetch) @@ -1088,7 +1088,7 @@ facilities for checking incoming mail.") (version-major+minor version) "/" name "-" version ".tar.gz")) (sha256 (base32 - "1s8qvr6fa9d0n179kdwgpsi72zkvpbh9q57q8fr2fjysgjl94zw9")))) + "098zpkmkk93372qnv6drgbfg8hp5mynspzc1735qgar6wdcqya70")))) (build-system gnu-build-system) (native-inputs `(("pkg-config" ,pkg-config))) diff --git a/gnu/packages/package-management.scm b/gnu/packages/package-management.scm index f675e22ad9..cabfc862ac 100644 --- a/gnu/packages/package-management.scm +++ b/gnu/packages/package-management.scm @@ -214,9 +214,9 @@ the Nix package manager.") ;; ;; Note: use a very short commit id; with a longer one, the limit on ;; hash-bang lines would be exceeded while running the tests. - (let ((commit "1162418ee88f155f6b14fd8926479c2176e40e76")) + (let ((commit "73a46451af333c77d2e79aa8764f51be8c34d1ae")) (package (inherit guix-0.12.0) - (version (string-append "0.12.0-5." (string-take commit 4))) + (version (string-append "0.12.0-6." (string-take commit 4))) (source (origin (method git-fetch) (uri (git-reference @@ -226,7 +226,7 @@ the Nix package manager.") (commit commit))) (sha256 (base32 - "16pxqbywhayazdgg9l19frigncmyq20j5fvaq4zgvm0iidndhfja")) + "1zfa6c1vf52rg7ba1nrz4hzgdwl16brc4iylcdnhl9mnkjg2fbr5")) (file-name (string-append "guix-" version "-checkout")))) (arguments (substitute-keyword-arguments (package-arguments guix-0.12.0) diff --git a/gnu/packages/patches/chicken-CVE-2016-6830+CVE-2016-6831.patch b/gnu/packages/patches/chicken-CVE-2016-6830+CVE-2016-6831.patch deleted file mode 100644 index 59decde0e9..0000000000 --- a/gnu/packages/patches/chicken-CVE-2016-6830+CVE-2016-6831.patch +++ /dev/null @@ -1,81 +0,0 @@ -diff -ur a/irregex-core.scm b/irregex-core.scm ---- a/irregex-core.scm 2016-09-11 19:03:00.000000000 -0400 -+++ b/irregex-core.scm 2017-01-01 22:24:08.000000000 -0500 -@@ -30,6 +30,8 @@ - - ;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;; - ;;;; History -+;; 0.9.6: 2016/12/05 - fixed exponential memory use of + in compilation -+;; of backtracking matcher. - ;; 0.9.5: 2016/09/10 - fixed a bug in irregex-fold handling of bow - ;; 0.9.4: 2015/12/14 - performance improvement for {n,m} matches - ;; 0.9.3: 2014/07/01 - R7RS library -@@ -3170,16 +3172,7 @@ - ((sre-empty? (sre-sequence (cdr sre))) - (error "invalid sre: empty *" sre)) - (else -- (letrec -- ((body -- (lp (sre-sequence (cdr sre)) -- n -- flags -- (lambda (cnk init src str i end matches fail) -- (body cnk init src str i end matches -- (lambda () -- (next cnk init src str i end matches fail) -- )))))) -+ (let ((body (rec (list '+ (sre-sequence (cdr sre)))))) - (lambda (cnk init src str i end matches fail) - (body cnk init src str i end matches - (lambda () -@@ -3204,10 +3197,21 @@ - (lambda () - (body cnk init src str i end matches fail)))))))) - ((+) -- (lp (sre-sequence (cdr sre)) -- n -- flags -- (rec (list '* (sre-sequence (cdr sre)))))) -+ (cond -+ ((sre-empty? (sre-sequence (cdr sre))) -+ (error "invalid sre: empty +" sre)) -+ (else -+ (letrec -+ ((body -+ (lp (sre-sequence (cdr sre)) -+ n -+ flags -+ (lambda (cnk init src str i end matches fail) -+ (body cnk init src str i end matches -+ (lambda () -+ (next cnk init src str i end matches fail) -+ )))))) -+ body)))) - ((=) - (rec `(** ,(cadr sre) ,(cadr sre) ,@(cddr sre)))) - ((>=) -diff -ur a/irregex-utils.scm b/irregex-utils.scm ---- a/irregex-utils.scm 2016-09-11 19:03:00.000000000 -0400 -+++ b/irregex-utils.scm 2017-01-01 22:25:25.000000000 -0500 -@@ -89,7 +89,7 @@ - (case (car x) - ((: seq) - (cond -- ((and (pair? (cddr x)) (pair? (cddr x)) (not (eq? x obj))) -+ ((and (pair? (cdr x)) (pair? (cddr x)) (not (eq? x obj))) - (display "(?:" out) (for-each lp (cdr x)) (display ")" out)) - (else (for-each lp (cdr x))))) - ((submatch) -diff -ur "a/manual-html/Unit irregex.html" "b/manual-html/Unit irregex.html" ---- "a/manual-html/Unit irregex.html" 2016-09-11 19:10:47.000000000 -0400 -+++ "b/manual-html/Unit irregex.html" 2017-01-01 22:26:05.000000000 -0500 -@@ -353,6 +353,6 @@ - <dd class="defsig"><p>Returns an optimized SRE matching any of the literal strings in the list, like Emacs' <tt>regexp-opt</tt>. Note this optimization doesn't help when irregex is able to build a DFA.</p></dd> - </dl> - <h5 id="sec:sre-.3estring"><a href="#sec:sre-.3estring">sre->string</a></h5><dl class="defsig"><dt class="defsig" id="def:sre-.3estring"><span class="sig"><tt>(sre->string <sre>)</tt></span> <span class="type">procedure</span></dt> --<dd class="defsig"><p>Convert an SRE to a POSIX-style regular expression string, if possible.</p></dd> -+<dd class="defsig"><p>Convert an SRE to a PCRE-style regular expression string, if possible.</p></dd> - </dl> --<hr /><p>Previous: <a href="Unit%20extras.html">Unit extras</a></p><p>Next: <a href="Unit%20srfi-1.html">Unit srfi-1</a></p></div></div></body> -\ No newline at end of file -+<hr /><p>Previous: <a href="Unit%20extras.html">Unit extras</a></p><p>Next: <a href="Unit%20srfi-1.html">Unit srfi-1</a></p></div></div></body> diff --git a/gnu/packages/patches/chicken-CVE-2017-6949.patch b/gnu/packages/patches/chicken-CVE-2017-6949.patch new file mode 100644 index 0000000000..00552eec76 --- /dev/null +++ b/gnu/packages/patches/chicken-CVE-2017-6949.patch @@ -0,0 +1,132 @@ +From: LemonBoy <thatlemon@gmail.com> +Date: Fri, 10 Mar 2017 16:29:47 +0100 +Subject: [PATCH] Add bound checking to all srfi-4 vector allocations. + +Do what C_allocate_vector already does and prevent the creation of a +vector that's too big or too small. +We should be very careful to avoid the latter case because the +allocation size is directly fed into `malloc' as 'x + sizeof(C_header)' +thus making possible to successfully allocate a vector smaller than the +C_header structure and get C_block_header_init to write over +uninitialized memory. + +To reduce code duplication, type checking is moved from each of the +make-*vector procedures to the common "alloc" helper procedure. + +Signed-off-by: Peter Bex <peter@more-magic.net> +Signed-off-by: Kooda <kooda@upyum.com> +--- + srfi-4.scm | 34 +++++++++++++++------------------- + 1 file changed, 15 insertions(+), 19 deletions(-) + +diff --git a/srfi-4.scm b/srfi-4.scm +index 7f5412b..69f58ba 100644 +--- a/srfi-4.scm ++++ b/srfi-4.scm +@@ -255,24 +255,28 @@ EOF + + ;;; Basic constructors: + +-(let* ([ext-alloc +- (foreign-lambda* scheme-object ([int bytes]) +- "C_word *buf = (C_word *)C_malloc(bytes + sizeof(C_header));" ++(let* ((ext-alloc ++ (foreign-lambda* scheme-object ((size_t bytes)) ++ "C_word *buf;" ++ "if (bytes > C_HEADER_SIZE_MASK) C_return(C_SCHEME_FALSE);" ++ "buf = (C_word *)C_malloc(bytes + sizeof(C_header));" + "if(buf == NULL) C_return(C_SCHEME_FALSE);" + "C_block_header_init(buf, C_make_header(C_BYTEVECTOR_TYPE, bytes));" +- "C_return(buf);") ] +- [ext-free +- (foreign-lambda* void ([scheme-object bv]) +- "C_free((void *)C_block_item(bv, 1));") ] +- [alloc ++ "C_return(buf);") ) ++ (ext-free ++ (foreign-lambda* void ((scheme-object bv)) ++ "C_free((void *)C_block_item(bv, 1));") ) ++ (alloc + (lambda (loc len ext?) ++ (##sys#check-exact len loc) ++ (when (fx< len 0) (##sys#error loc "size is negative" len)) + (if ext? +- (let ([bv (ext-alloc len)]) ++ (let ((bv (ext-alloc len))) + (or bv + (##sys#error loc "not enough memory - cannot allocate external number vector" len)) ) +- (let ([bv (##sys#allocate-vector len #t #f #t)]) ; this could be made better... ++ (let ((bv (##sys#allocate-vector len #t #f #t))) ; this could be made better... + (##core#inline "C_string_to_bytevector" bv) +- bv) ) ) ] ) ++ bv) ) ) ) ) + + (set! release-number-vector + (lambda (v) +@@ -282,7 +286,6 @@ EOF + + (set! make-u8vector + (lambda (len #!optional (init #f) (ext? #f) (fin? #t)) +- (##sys#check-exact len 'make-u8vector) + (let ((v (##sys#make-structure 'u8vector (alloc 'make-u8vector len ext?)))) + (when (and ext? fin?) (set-finalizer! v ext-free)) + (if (not init) +@@ -295,7 +298,6 @@ EOF + + (set! make-s8vector + (lambda (len #!optional (init #f) (ext? #f) (fin? #t)) +- (##sys#check-exact len 'make-s8vector) + (let ((v (##sys#make-structure 's8vector (alloc 'make-s8vector len ext?)))) + (when (and ext? fin?) (set-finalizer! v ext-free)) + (if (not init) +@@ -308,7 +310,6 @@ EOF + + (set! make-u16vector + (lambda (len #!optional (init #f) (ext? #f) (fin? #t)) +- (##sys#check-exact len 'make-u16vector) + (let ((v (##sys#make-structure 'u16vector (alloc 'make-u16vector (##core#inline "C_fixnum_shift_left" len 1) ext?)))) + (when (and ext? fin?) (set-finalizer! v ext-free)) + (if (not init) +@@ -321,7 +322,6 @@ EOF + + (set! make-s16vector + (lambda (len #!optional (init #f) (ext? #f) (fin? #t)) +- (##sys#check-exact len 'make-s16vector) + (let ((v (##sys#make-structure 's16vector (alloc 'make-s16vector (##core#inline "C_fixnum_shift_left" len 1) ext?)))) + (when (and ext? fin?) (set-finalizer! v ext-free)) + (if (not init) +@@ -334,7 +334,6 @@ EOF + + (set! make-u32vector + (lambda (len #!optional (init #f) (ext? #f) (fin? #t)) +- (##sys#check-exact len 'make-u32vector) + (let ((v (##sys#make-structure 'u32vector (alloc 'make-u32vector (##core#inline "C_fixnum_shift_left" len 2) ext?)))) + (when (and ext? fin?) (set-finalizer! v ext-free)) + (if (not init) +@@ -347,7 +346,6 @@ EOF + + (set! make-s32vector + (lambda (len #!optional (init #f) (ext? #f) (fin? #t)) +- (##sys#check-exact len 'make-s32vector) + (let ((v (##sys#make-structure 's32vector (alloc 'make-s32vector (##core#inline "C_fixnum_shift_left" len 2) ext?)))) + (when (and ext? fin?) (set-finalizer! v ext-free)) + (if (not init) +@@ -360,7 +358,6 @@ EOF + + (set! make-f32vector + (lambda (len #!optional (init #f) (ext? #f) (fin? #t)) +- (##sys#check-exact len 'make-f32vector) + (let ((v (##sys#make-structure 'f32vector (alloc 'make-f32vector (##core#inline "C_fixnum_shift_left" len 2) ext?)))) + (when (and ext? fin?) (set-finalizer! v ext-free)) + (if (not init) +@@ -375,7 +372,6 @@ EOF + + (set! make-f64vector + (lambda (len #!optional (init #f) (ext? #f) (fin? #t)) +- (##sys#check-exact len 'make-f64vector) + (let ((v (##sys#make-structure + 'f64vector + (alloc 'make-f64vector (##core#inline "C_fixnum_shift_left" len 3) ext?)))) +-- +2.1.4 + diff --git a/gnu/packages/perl-web.scm b/gnu/packages/perl-web.scm index 9c92a95dad..75637e6545 100644 --- a/gnu/packages/perl-web.scm +++ b/gnu/packages/perl-web.scm @@ -26,7 +26,7 @@ (define-public perl-mojolicious (package (name "perl-mojolicious") - (version "7.10") + (version "7.29") (source (origin (method url-fetch) @@ -34,7 +34,7 @@ version ".tar.gz")) (sha256 (base32 - "0811f3wajgf71y02dr2khqnaswjh582pcvhv93k101qpg61syihn")))) + "1kmyb9axqbklyvr3l4d6mxnb0r97s9hzn7jpzksgckklp1ic8sqh")))) (build-system perl-build-system) (home-page "http://mojolicious.org/") (synopsis "Real-time web framework") diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm index ea1d691c18..89aca2c540 100644 --- a/gnu/packages/python.scm +++ b/gnu/packages/python.scm @@ -1725,14 +1725,14 @@ standard library.") (define-public python-pafy (package (name "python-pafy") - (version "0.5.2") + (version "0.5.3.1") (source (origin (method url-fetch) (uri (pypi-uri "pafy" version)) (sha256 (base32 - "1ckvrypyvb7jbqlgwdz0y337ajagjv7dgxyns326nqwypn1wpq0i")))) + "1a7dxi95m1043rxx1r5x3ngb66nwlq6aqcasyqqjzmmmjps4zrim")))) (build-system python-build-system) (arguments `(#:tests? #f)) ; Currently pafy can not find itself in the tests @@ -4372,14 +4372,14 @@ both of which are installed automatically if you install this library.") (define-public python-sqlalchemy-utils (package (name "python-sqlalchemy-utils") - (version "0.32.11") + (version "0.32.13") (source (origin (method url-fetch) (uri (pypi-uri "SQLAlchemy-Utils" version)) (sha256 (base32 - "1wghyvk73cmq3iqyg3fczw128fv2pan2v76m0xg1bw05h8fhvnk3")))) + "0vsib7gidjamzsz6w4s5pdhxzxsrkghjnm4sqwk94igjrl3i5ixj")))) (build-system python-build-system) (arguments '(#:tests? #f)) ; FIXME: Many tests require a running database server. @@ -4796,7 +4796,7 @@ etc. The core of this module is a decorator factory.") (define-public python-drmaa (package (name "python-drmaa") - (version "0.7.6") + (version "0.7.7") (source (origin (method url-fetch) @@ -4804,7 +4804,7 @@ etc. The core of this module is a decorator factory.") "https://pypi.python.org/packages/source/d/drmaa/drmaa-" version ".tar.gz")) (sha256 - (base32 "0bzl9f9g34dlhwf09i3fdv7dqqzf2iq0w7d6c2bafx1nlap8qfbh")))) + (base32 "0xzqriqyvk5b8hszbavsyxd29wm3sxirm8zvvdm73rs2iq7w4hkx")))) (build-system python-build-system) ;; The test suite requires libdrmaa which is provided by the cluster ;; environment. At runtime the environment variable DRMAA_LIBRARY_PATH @@ -5666,14 +5666,14 @@ libxml2 and libxslt.") (define-public python-beautifulsoup4 (package (name "python-beautifulsoup4") - (version "4.5.1") + (version "4.5.3") (source (origin (method url-fetch) (uri (pypi-uri "beautifulsoup4" version)) (sha256 (base32 - "1qgmhw65ncsgccjhslgkkszif47q6gvxwqv4mim17agxd81p951w")))) + "0glaw1vyxnbp03fni7h5496n6iib0n5iim4gax1n0ngscs9s075j")))) (build-system python-build-system) (arguments `(#:phases @@ -6742,7 +6742,7 @@ provided that can be used to do various manipulations with LilyPond files.") (define-public python-appdirs (package (name "python-appdirs") - (version "1.4.0") + (version "1.4.3") (source (origin (method url-fetch) @@ -6752,7 +6752,7 @@ provided that can be used to do various manipulations with LilyPond files.") ".tar.gz")) (sha256 (base32 - "1iddva7v3fq0aqzsahkazxr7vpw28mqcrsy818z4wyiqnkplbhlg")))) + "14id6wxi12lgyw0mg3bcfnf888ad07jz9yj46gfzhn186z8rcn4y")))) (build-system python-build-system) (home-page "http://github.com/ActiveState/appdirs") (synopsis @@ -7126,13 +7126,13 @@ implementations of ASN.1-based codecs and protocols.") (define-public python-ipaddress (package (name "python-ipaddress") - (version "1.0.16") + (version "1.0.18") (source (origin (method url-fetch) (uri (pypi-uri "ipaddress" version)) (sha256 (base32 - "1c3imabdrw8nfksgjjflzg7h4ynjckqacb188rf541m74arq4cas")))) + "1q8klj9d84cmxgz66073x1j35cplr3r77vx1znhxiwl5w74391ax")))) (build-system python-build-system) (home-page "https://github.com/phihag/ipaddress") (synopsis "IP address manipulation library") @@ -8994,14 +8994,14 @@ Python at your fingertips, in Lisp form.") (define-public python-rauth (package (name "python-rauth") - (version "0.7.2") + (version "0.7.3") (source (origin (method url-fetch) (uri (pypi-uri "rauth" version)) (sha256 (base32 - "00pq7zw429hhza9c0qzxiqp77m653jv09z92nralnmzwdf6pzicf")))) + "02kv8w8l98ky223avyq7vw7x1f2ya9chrm59r77ylq45qb0xnk2j")))) (build-system python-build-system) (arguments `(#:test-target "check")) @@ -9090,14 +9090,14 @@ otherwise matches 3.2’s API.") (define-public python2-futures (package (name "python2-futures") - (version "3.0.3") + (version "3.0.5") (source (origin (method url-fetch) (uri (pypi-uri "futures" version)) (sha256 (base32 - "1vcb34dqhzkhbq1957vdjszhhm5y3j9ba88dgwhqx2zynhmk9qig")))) + "1pw1z4329xvlabdpwqa6b7v2fxf7hl64m4cgr22ckbym8m8m4hh5")))) (build-system python-build-system) (arguments `(#:python ,python-2)) (home-page "https://github.com/agronholm/pythonfutures") @@ -12294,13 +12294,13 @@ failures.") (define-public python-natsort (package (name "python-natsort") - (version "5.0.1") + (version "5.0.2") (source (origin (method url-fetch) (uri (pypi-uri "natsort" version)) (sha256 (base32 - "1abld5p4a6n5zjnyw5mi2pv37gqalcybv2brjr2y6l9l2p8v9mja")))) + "0bh6j0l8iapjnsgg3bs6q075cnzjl6zw1vlgqyv3qrygm2cxypkn")))) (build-system python-build-system) (arguments `(#:phases diff --git a/gnu/packages/rust.scm b/gnu/packages/rust.scm index 2dedef8373..af4d322a73 100644 --- a/gnu/packages/rust.scm +++ b/gnu/packages/rust.scm @@ -229,18 +229,21 @@ rustc-bootstrap and cargo-bootstrap packages.") (("/usr/bin/env") (which "env"))) ;; Avoid curl as a build dependency. (substitute* "configure" - (("probe_need CFG_CURL curl") "")))) + (("probe_need CFG_CURL curl") "")) + #t)) (add-after 'unpack 'set-env (lambda _ (setenv "SHELL" (which "sh")) - (setenv "CONFIG_SHELL" (which "sh")))) + (setenv "CONFIG_SHELL" (which "sh")) + #t)) (add-after 'unpack 'patch-tests (lambda* (#:key inputs #:allow-other-keys) - (substitute* "src/tools/tidy/src/main.rs" - (("^.*cargo.*::check.*$") "")) - (substitute* "src/libstd/process.rs" - (("\"/bin/sh\"") (string-append "\"" (assoc-ref inputs "bash") "/bin/sh\""))) - #t)) + (let ((bash (assoc-ref inputs "bash"))) + (substitute* "src/tools/tidy/src/main.rs" + (("^.*cargo.*::check.*$") "")) + (substitute* "src/libstd/process.rs" + (("\"/bin/sh\"") (string-append "\"" bash "/bin/sh\""))) + #t))) (replace 'configure (lambda* (#:key inputs outputs #:allow-other-keys) (let* ((out (assoc-ref outputs "out")) @@ -275,7 +278,8 @@ rustc-bootstrap and cargo-bootstrap packages.") ;; Let gcc find ld and libc startup files. (wrap-program (string-append out "/bin/rustc") `("PATH" ":" prefix (,(string-append ld-wrapper "/bin"))) - `("LIBRARY_PATH" ":" suffix (,(string-append libc "/lib")))))))))) + `("LIBRARY_PATH" ":" suffix (,(string-append libc "/lib")))) + #t)))))) ;; rustc invokes gcc, so we need to set its search paths accordingly. (native-search-paths (package-native-search-paths gcc)) (synopsis "Compiler for the Rust progamming language") diff --git a/gnu/packages/scheme.scm b/gnu/packages/scheme.scm index e1dba9bed7..fec872f5f9 100644 --- a/gnu/packages/scheme.scm +++ b/gnu/packages/scheme.scm @@ -325,18 +325,16 @@ mashups, office (web agendas, mail clients, ...), etc.") (define-public chicken (package (name "chicken") - (version "4.11.1") + (version "4.12.0") (source (origin (method url-fetch) - (uri (string-append "http://code.call-cc.org/releases/" + (uri (string-append "https://code.call-cc.org/releases/" version "/chicken-" version ".tar.gz")) - (uri (string-append "http://code.call-cc.org/dev-snapshots/" - "2016/09/12/chicken-" version ".tar.gz")) (sha256 (base32 - "1rwymbbmnwdyhdzilv9w75an989xw9kjf3x52iqdng3nphpflcga")) + "12b9gaa9lqh39lj1v4wm48f6z8ww3jdkvc5bh9gqqvn6kd2wwnk0")) (patches - (search-patches "chicken-CVE-2016-6830+CVE-2016-6831.patch")))) + (search-patches "chicken-CVE-2017-6949.patch")))) (build-system gnu-build-system) (arguments `(#:modules ((guix build gnu-build-system) @@ -359,12 +357,6 @@ mashups, office (web agendas, mail clients, ...), etc.") ;; Parallel builds are not supported, as noted in README. #:parallel-build? #f)) - ;; One of the tests ("testing direct invocation can detect calls of too - ;; many arguments...") times out when building with a more recent GCC. - ;; The problem was reported here: - ;; https://lists.gnu.org/archive/html/chicken-hackers/2015-04/msg00059.html - (native-inputs - `(("gcc" ,gcc-4.8))) (home-page "http://www.call-cc.org/") (synopsis "R5RS Scheme implementation that compiles native code via C") (description diff --git a/gnu/packages/video.scm b/gnu/packages/video.scm index cf54bbf9a4..00117067ed 100644 --- a/gnu/packages/video.scm +++ b/gnu/packages/video.scm @@ -984,7 +984,7 @@ access to mpv's powerful playback capabilities.") (define-public youtube-dl (package (name "youtube-dl") - (version "2017.03.16") + (version "2017.03.22") (source (origin (method url-fetch) (uri (string-append "https://yt-dl.org/downloads/" @@ -992,7 +992,7 @@ access to mpv's powerful playback capabilities.") version ".tar.gz")) (sha256 (base32 - "14nlgl0kh4mwl7sx58vd7nxr5iklxi00612lmydy91ngm6ykrpsm")))) + "1zz97g23diggcnqg2hjq9grijskly8ag727f1i509hl7z0lxkh69")))) (build-system python-build-system) (arguments ;; The problem here is that the directory for the man page and completion |