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| author | Ben Woodcroft <donttrustben@gmail.com> | 2017-07-23 22:35:52 +1000 |
|---|---|---|
| committer | Ben Woodcroft <donttrustben@gmail.com> | 2017-07-23 22:35:52 +1000 |
| commit | d3dce32216905a3beab6cdc6ba444d92f934ea29 (patch) | |
| tree | b91e6210e2e30b051cdf955d691f913748c7ef17 /gnu/packages/patches | |
| parent | 6c1a317e29c45e85e3a0e050612cdefe470b100c (diff) | |
| download | gnu-guix-d3dce32216905a3beab6cdc6ba444d92f934ea29.tar gnu-guix-d3dce32216905a3beab6cdc6ba444d92f934ea29.tar.gz | |
gnu: metabat: Fix boost-related compilation issue.
Reported by Leo Famulari.
* gnu/packages/patches/metabat-fix-boost-issue.patch: New file.
* gnu/packages/bioinformatics.scm (metabat): Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
Diffstat (limited to 'gnu/packages/patches')
| -rw-r--r-- | gnu/packages/patches/metabat-fix-boost-issue.patch | 27 |
1 files changed, 27 insertions, 0 deletions
diff --git a/gnu/packages/patches/metabat-fix-boost-issue.patch b/gnu/packages/patches/metabat-fix-boost-issue.patch new file mode 100644 index 0000000000..3382d84d66 --- /dev/null +++ b/gnu/packages/patches/metabat-fix-boost-issue.patch @@ -0,0 +1,27 @@ +This patch fixes the issue described at +https://bitbucket.org/berkeleylab/metabat/issues/28/compilation-fail-with-boost-164 + +diff --git a/src/metabat.h b/src/metabat.h +index 32ae94c..2292c04 100644 +--- a/src/metabat.h ++++ b/src/metabat.h +@@ -35,6 +35,7 @@ KSEQ_INIT(gzFile, gzread) + + #include <boost/program_options.hpp> + #include <boost/algorithm/string.hpp> ++#include <boost/serialization/array_wrapper.hpp> + #include <boost/numeric/ublas/matrix.hpp> + #include <boost/math/distributions.hpp> + #include <boost/serialization/serialization.hpp> +diff --git a/src/metabat2.h b/src/metabat2.h +index 60a9998..19fa815 100644 +--- a/src/metabat2.h ++++ b/src/metabat2.h +@@ -41,6 +41,7 @@ KSEQ_INIT(gzFile, gzread) + + #include <boost/program_options.hpp> + #include <boost/algorithm/string.hpp> ++#include <boost/serialization/array_wrapper.hpp> + #include <boost/numeric/ublas/matrix.hpp> + #include <boost/numeric/ublas/matrix_sparse.hpp> + #include <boost/numeric/ublas/matrix_proxy.hpp> |