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| author | Paul Garlick <pgarlick@tourbillion-technology.com> | 2018-11-12 16:00:33 +0000 |
|---|---|---|
| committer | Ludovic Courtès <ludo@gnu.org> | 2018-11-14 21:34:08 +0100 |
| commit | 54fcd547b330423c91559ad384092c1a4a786065 (patch) | |
| tree | 49de054a4334b463a05dffe75ab00c3c2e9d7f9c /gnu/packages/mpi.scm | |
| parent | 0fe1fba4af41f267c4bb2c006fb37f42422ab703 (diff) | |
| download | gnu-guix-54fcd547b330423c91559ad384092c1a4a786065.tar gnu-guix-54fcd547b330423c91559ad384092c1a4a786065.tar.gz | |
gnu: Add python-mpi4py.
* gnu/packages/mpi.scm (python-mpi4py): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Diffstat (limited to 'gnu/packages/mpi.scm')
| -rw-r--r-- | gnu/packages/mpi.scm | 42 |
1 files changed, 42 insertions, 0 deletions
diff --git a/gnu/packages/mpi.scm b/gnu/packages/mpi.scm index fc8aadef29..f08a7f5f88 100644 --- a/gnu/packages/mpi.scm +++ b/gnu/packages/mpi.scm @@ -6,6 +6,7 @@ ;;; Copyright © 2017 Dave Love <fx@gnu.org> ;;; Copyright © 2017 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr> +;;; Copyright © 2018 Paul Garlick <pgarlick@tourbillion-technology.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -29,6 +30,7 @@ #:use-module (guix download) #:use-module (guix utils) #:use-module (guix build-system gnu) + #:use-module (guix build-system python) #:use-module (gnu packages) #:use-module (gnu packages gcc) #:use-module (gnu packages linux) @@ -263,3 +265,43 @@ only provides @code{MPI_THREAD_FUNNELED}."))) ;; in the build environment than the package wants while testing. (setenv "OMPI_MCA_rmaps_base_oversubscribe" "yes") #t)) + +(define-public python-mpi4py + (package + (name "python-mpi4py") + (version "3.0.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "mpi4py" version)) + (sha256 + (base32 + "1mzgd26dfv4vwbci8gq77ss9f0x26i9aqzq9b9vs9ndxhlnv0mxl")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'build 'mpi-setup + ,%openmpi-setup) + (add-before 'check 'pre-check + (lambda _ + ;; Skip BaseTestSpawn class (causes error 'ompi_dpm_dyn_init() + ;; failed --> Returned "Unreachable"' in chroot environment). + (substitute* "test/test_spawn.py" + (("unittest.skipMPI\\('openmpi\\(<3.0.0\\)'\\)") + "unittest.skipMPI('openmpi')")) + #t))))) + (inputs + `(("openmpi" ,openmpi))) + (home-page "https://bitbucket.org/mpi4py/mpi4py/") + (synopsis "Python bindings for the Message Passing Interface standard") + (description "MPI for Python (mpi4py) provides bindings of the Message +Passing Interface (MPI) standard for the Python programming language, allowing +any Python program to exploit multiple processors. + +mpi4py is constructed on top of the MPI-1/MPI-2 specification and provides an +object oriented interface which closely follows MPI-2 C++ bindings. It +supports point-to-point and collective communications of any picklable Python +object as well as optimized communications of Python objects (such as NumPy +arrays) that expose a buffer interface.") + (license bsd-3))) |