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| author | Ricardo Wurmus <rekado@elephly.net> | 2019-03-29 14:59:12 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2019-03-29 17:13:45 +0100 |
| commit | 051e8e1a5bec01952012cf7f1903cd72add0e25c (patch) | |
| tree | 389b671c7f72f719e448ff21b2640b69f98222ac /gnu/packages/bioconductor.scm | |
| parent | c54ab337bcda46f4f9b0c9b4798a853e4d5a85b9 (diff) | |
| download | gnu-guix-051e8e1a5bec01952012cf7f1903cd72add0e25c.tar gnu-guix-051e8e1a5bec01952012cf7f1903cd72add0e25c.tar.gz | |
gnu: Add r-rgadem.
* gnu/packages/bioconductor.scm (r-rgadem): New variable.
Diffstat (limited to 'gnu/packages/bioconductor.scm')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 25 |
1 files changed, 25 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 48c6009864..6df46ef379 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -3184,3 +3184,28 @@ epigenome- and transcriptome-wide association studies. To this end bacon constructs an empirical null distribution using a Gibbs Sampling algorithm by fitting a three-component normal mixture on z-scores.") (license license:gpl2+))) + +(define-public r-rgadem + (package + (name "r-rgadem") + (version "2.30.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "rGADEM" version)) + (sha256 + (base32 + "1a3mvxabp7yb275cv1wr0rzyvjhnsaysk2hnmll4z4cci171z2j2")))) + (properties `((upstream-name . "rGADEM"))) + (build-system r-build-system) + (propagated-inputs + `(("r-biostrings" ,r-biostrings) + ("r-bsgenome" ,r-bsgenome) + ("r-iranges" ,r-iranges) + ("r-seqlogo" ,r-seqlogo))) + (home-page "https://bioconductor.org/packages/rGADEM/") + (synopsis "De novo sequence motif discovery") + (description + "rGADEM is an efficient de novo motif discovery tool for large-scale +genomic sequence data.") + (license license:artistic2.0))) |