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authorRicardo Wurmus <ricardo.wurmus@mdc-berlin.de>2016-05-17 15:22:30 +0200
committerRicardo Wurmus <rekado@elephly.net>2016-12-17 15:56:48 +0100
commitb26abe4f148ea04145cb1f62122eb560b64a0139 (patch)
tree02f1878d6f2f038c295ed7a7a3fc49a7417380a1
parentad68f7fa58daeff542d2fba19f65928c1af5799b (diff)
downloadgnu-guix-b26abe4f148ea04145cb1f62122eb560b64a0139.tar
gnu-guix-b26abe4f148ea04145cb1f62122eb560b64a0139.tar.gz
import cran: Ignore default R packages.
* guix/import/cran.scm (default-r-packages): New variable. (description->package): Drop default R packages from list of inputs.
-rw-r--r--guix/import/cran.scm44
1 files changed, 39 insertions, 5 deletions
diff --git a/guix/import/cran.scm b/guix/import/cran.scm
index 313e26b03d..09796e0159 100644
--- a/guix/import/cran.scm
+++ b/guix/import/cran.scm
@@ -149,6 +149,38 @@ empty list when the FIELD cannot be found."
(string-any char-set:whitespace item)))
(map string-trim-both items))))))
+(define default-r-packages
+ (list "KernSmooth"
+ "MASS"
+ "Matrix"
+ "base"
+ "boot"
+ "class"
+ "cluster"
+ "codetools"
+ "compiler"
+ "datasets"
+ "foreign"
+ "grDevices"
+ "graphics"
+ "grid"
+ "lattice"
+ "methods"
+ "mgcv"
+ "nlme"
+ "nnet"
+ "parallel"
+ "rpart"
+ "spatial"
+ "splines"
+ "stats"
+ "stats4"
+ "survival"
+ "tcltk"
+ "tools"
+ "translations"
+ "utils"))
+
(define (guix-name name)
"Return a Guix package name for a given R package name."
(string-append "r-" (string-map (match-lambda
@@ -180,11 +212,13 @@ from the alist META, which was derived from the R package's DESCRIPTION file."
(_ #f)))
(tarball (with-store store (download-to-store store source-url)))
(sysdepends (map string-downcase (listify meta "SystemRequirements")))
- (propagate (lset-union equal?
- (listify meta "Imports")
- (listify meta "LinkingTo")
- (delete "R"
- (listify meta "Depends")))))
+ (propagate (filter (lambda (name)
+ (not (member name default-r-packages)))
+ (lset-union equal?
+ (listify meta "Imports")
+ (listify meta "LinkingTo")
+ (delete "R"
+ (listify meta "Depends"))))))
(values
`(package
(name ,(guix-name name))