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| author | Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> | 2016-04-06 16:34:19 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> | 2016-04-19 12:16:01 +0200 |
| commit | 4db9433aa02ced6112170a6815377be3da6d2ef9 (patch) | |
| tree | 27956ac78d4b2acedca176344e55599e7b6f0706 | |
| parent | 3fd4b90d1dee4547df16e1469e8dcefce1ac4f36 (diff) | |
| download | gnu-guix-4db9433aa02ced6112170a6815377be3da6d2ef9.tar gnu-guix-4db9433aa02ced6112170a6815377be3da6d2ef9.tar.gz | |
gnu: Add python-twobitreader.
* gnu/packages/bioinformatics.scm (python-twobitreader,
python2-twobitreader): New variables.
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 28 |
1 files changed, 28 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index b76aadc6a2..bcb27571a1 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -922,6 +922,34 @@ also includes an interface for tabix.") (define-public python2-pysam (package-with-python2 python-pysam)) +(define-public python-twobitreader + (package + (name "python-twobitreader") + (version "3.1.2") + (source (origin + (method url-fetch) + (uri (pypi-uri "twobitreader" version)) + (sha256 + (base32 + "0y408fp6psqzwxpcpqn0wp7fr41dwz8d54wpj6j261fj5q8vs169")))) + (properties `((python2-variant . ,(delay python2-twobitreader)))) + (build-system python-build-system) + (native-inputs + `(("python-sphinx" ,python-sphinx))) + (home-page "https://github.com/benjschiller/twobitreader") + (synopsis "Python library for reading .2bit files") + (description + "twobitreader is a Python library for reading .2bit files as used by the +UCSC genome browser.") + (license license:artistic2.0))) + +(define-public python2-twobitreader + (let ((base (package-with-python2 (strip-python2-variant python-twobitreader)))) + (package + (inherit base) + (native-inputs `(("python2-setuptools" ,python2-setuptools) + ,@(package-native-inputs base)))))) + (define-public cd-hit (package (name "cd-hit") |