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| author | Roel Janssen <roel@gnu.org> | 2017-09-05 11:02:03 +0200 |
|---|---|---|
| committer | Roel Janssen <roel@gnu.org> | 2017-09-05 11:02:03 +0200 |
| commit | 325c039c1da3f7686d8b1456427eea8fdca92d05 (patch) | |
| tree | 530bec3d1dd1fb6610d6fb2ae5ab6a9031ab17eb | |
| parent | c0ac72e18c8a53f7173e7f8b24f2e7aaf743c97e (diff) | |
| download | gnu-guix-325c039c1da3f7686d8b1456427eea8fdca92d05.tar gnu-guix-325c039c1da3f7686d8b1456427eea8fdca92d05.tar.gz | |
gnu: Add r-sparql.
* gnu/packages/bioinformatics.scm (r-sparql): New variable.
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 23 |
1 files changed, 23 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 5e8eef4e1c..bf8eb2e697 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -6137,6 +6137,29 @@ data. It is derived from the UCSC hg19 genome and based on the \"knownGene\" track. The database is exposed as a @code{TxDb} object.") (license license:artistic2.0))) +(define-public r-sparql + (package + (name "r-sparql") + (version "1.16") + (source (origin + (method url-fetch) + (uri (cran-uri "SPARQL" version)) + (sha256 + (base32 + "0gak1q06yyhdmcxb2n3v0h9gr1vqd0viqji52wpw211qp6r6dcrc")))) + (properties `((upstream-name . "SPARQL"))) + (build-system r-build-system) + (propagated-inputs + `(("r-rcurl" ,r-rcurl) + ("r-xml" ,r-xml))) + (home-page "http://cran.r-project.org/web/packages/SPARQL") + (synopsis "SPARQL client for R") + (description "This package provides an interface to use SPARQL to pose +SELECT or UPDATE queries to an end-point.") + ;; The only license indication is found in the DESCRIPTION file, + ;; which states GPL-3. So we cannot assume GPLv3+. + (license license:gpl3))) + (define-public vsearch (package (name "vsearch") |