From fb2d58b81d6b41769330d305d27edded67db091e Mon Sep 17 00:00:00 2001 From: Sharlatan Hellseher Date: Sat, 20 Apr 2024 21:53:00 +0100 Subject: gnu: python-asdf: Adjust inputs. python-asdf requires python-semantic-version during runtime which may be reproduced by: guix shell python-asdf python -- python3 -c 'import asdf' <...> ModuleNotFoundError: No module named 'semantic_version' * gnu/packages/astronomy.scm (python-asdf): Adjust inputs. [native-inputs]: Remove python-semantic-version. [propagated-inputs]: Add python-semantic-version. (python-asdf-astropy, python-asdf-compression, python-asdf-coordinates-schemas, python-asdf-wcs-schemas, python-asdf-zarr, python-astroalignn, python-ccdproc, python-crds, python-ginga, python-gwcs, python-photutils, python-rad, python-reproject, python-roman-datamodels, python-spectral-cube, python-specutils, python-stcal, python-stdatamodels, python-stpipe, python-stsynphot, python-sunpy, python-synphot, python-tweakwcs): Remove python-semantic-version from native or propagated inputs. Change-Id: I96bf57f77c327f4ff208e0b173e84bcdd4c287da Reported-by: Iliya Tikhonenko --- gnu/packages/astronomy.scm | 41 +++++++++-------------------------------- 1 file changed, 9 insertions(+), 32 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 47a8517b58..ff2275739f 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -522,8 +522,7 @@ in FITS files.") python-shapely)) (native-inputs (list python-pytest-astropy - python-pytest-mpl - python-semantic-version)) + python-pytest-mpl)) (home-page "http://aplpy.github.io") (synopsis "Astronomical Plotting Library in Python") (description @@ -753,7 +752,6 @@ Python.") python-docutils python-pytest-astropy python-pytest-astropy-header - python-semantic-version python-tornado)) (home-page "https://ejeschke.github.io/ginga/") (synopsis "Scientific image viewer and toolkit for FITS files") @@ -2014,8 +2012,7 @@ is independent of and does not use @code{casacore}.") (build-system pyproject-build-system) (native-inputs (list python-memory-profiler - python-pytest-astropy - python-semantic-version)) + python-pytest-astropy)) (propagated-inputs (list python-astropy python-astroscrappy @@ -2138,7 +2135,6 @@ monochromatic sequential colormaps like @code{blue}, @code{green}, and python-nose python-pylint python-pytest - python-semantic-version python-setuptools-scm)) (home-page "https://hst-crds.stsci.edu") (synopsis "Calibration Reference Data System for HST and JWST") @@ -2481,7 +2477,6 @@ setup(ext_modules=get_extensions())"))))) python-extension-helpers python-pytest-astropy python-pytest-xdist - python-semantic-version python-setuptools-scm)) (home-page "https://github.com/astropy/photutils") (synopsis "Source detection and photometry") @@ -2792,7 +2787,6 @@ setup(ext_modules=get_extensions())"))))) python-pytest-astropy python-pytest-xdist ;; python-sunpy ; circular dependencies, test optional - python-semantic-version python-setuptools-scm)) (home-page "https://reproject.readthedocs.io") (synopsis "Astronomical image reprojection in Python") @@ -2909,7 +2903,6 @@ python_files = test_*.py")))))))) python-reproject python-scikit-image python-scipy - python-semantic-version ;; python-spiceypy ; Not packed yet in Guix, long jorney. python-sqlalchemy python-tqdm @@ -3069,7 +3062,6 @@ elevation, solar azimuth, rahukaalam, and the phases of the moon.") python-pytest-astropy python-pytest-xdist python-regions - python-semantic-version python-setuptools-scm)) (home-page "https://spectral-cube.readthedocs.io/en/latest/") (synopsis "Library for reading and analyzing astrophysical spectral data cubes") @@ -3124,7 +3116,6 @@ of axis order, spatial projections, and spectral units that exist in the wild. (native-inputs (list python-matplotlib python-pytest-astropy - python-semantic-version python-setuptools-scm python-spectral-cube)) (home-page "https://specutils.readthedocs.io/") @@ -3322,7 +3313,6 @@ image processing functions: @code{xyxymatch}, @code{geomap}.") python-pytest python-pytest-cov python-pytest-doctestplus - python-semantic-version python-setuptools-scm)) (home-page "https://github.com/spacetelescope/stcal") (synopsis "STScI tools and algorithms used in calibration pipelines") @@ -3364,7 +3354,6 @@ image processing functions: @code{xyxymatch}, @code{geomap}.") python-pytest-doctestplus python-pytest-xdist python-scipy - python-semantic-version python-setuptools-scm)) (home-page "https://github.com/spacetelescope/stdatamodels") (synopsis @@ -3390,8 +3379,8 @@ implemented in the @acronym{JWST, James Webb Space Telescope} and ;; See https://github.com/spacetelescope/stpipe/issues/114 #:test-flags #~(list "-k" "not test_roman_datamodel"))) (build-system pyproject-build-system) - (propagated-inputs (list python-asdf python-astropy python-crds - python-semantic-version python-stdatamodels)) + (propagated-inputs + (list python-asdf python-astropy python-crds python-stdatamodels)) (native-inputs (list python-pytest python-pytest-doctestplus python-pytest-openfiles python-setuptools-scm)) (home-page "https://github.com/spacetelescope/stpipe") @@ -3429,7 +3418,6 @@ implementing calibration pipeline software.") (native-inputs (list python-pytest python-pytest-astropy python-pytest-astropy-header - python-semantic-version python-setuptools-scm)) (home-page "https://github.com/spacetelescope/stsynphot_refactor") (synopsis "Synthetic photometry using Astropy for HST and JWST") @@ -4423,7 +4411,6 @@ object.") (native-inputs (list python-pytest python-pytest-astropy - python-semantic-version python-setuptools-scm)) (home-page "https://github.com/spacetelescope/synphot_refactor") (synopsis "Synthetic photometry using Astropy") @@ -4457,7 +4444,6 @@ of the old packages.") python-pytest python-pytest-cov python-scipy - python-semantic-version python-setuptools-scm)) (home-page "https://tweakwcs.readthedocs.io/en/latest/") (synopsis @@ -4503,7 +4489,6 @@ between image and reference catalogs. Currently only aligning images with python-pytest-doctestplus python-pytest-remotedata python-pytest-xdist - python-semantic-version python-setuptools-scm)) (propagated-inputs (list python-asdf-standard @@ -4513,7 +4498,8 @@ between image and reference catalogs. Currently only aligning images with python-jmespath python-lz4 python-numpy - python-pyyaml)) + python-pyyaml + python-semantic-version)) (home-page "https://github.com/asdf-format/asdf") (synopsis "Python tools to handle ASDF files") (description @@ -4549,7 +4535,6 @@ implementation of the ASDF Standard.") (native-inputs (list python-numpy python-pytest - python-semantic-version python-setuptools-scm)) (propagated-inputs (list python-asdf @@ -4648,7 +4633,6 @@ package such as asdf-astropy.") (native-inputs (list python-pytest python-pytest-xdist - python-semantic-version python-setuptools-scm)) (propagated-inputs (list python-asdf)) @@ -4767,7 +4751,7 @@ install an implementation package such as asdf-astropy.") (propagated-inputs (list python-asdf python-fsspec python-zarr)) (native-inputs - (list python-pytest python-semantic-version python-setuptools-scm)) + (list python-pytest python-setuptools-scm)) (home-page "https://github.com/asdf-format/asdf-zarr") (synopsis "Asdf extension to support Zarr arrays") (description @@ -4804,7 +4788,6 @@ specification.") python-pytest-astropy python-pytest-xdist python-scipy - python-semantic-version python-setuptools-scm)) (propagated-inputs (list python-asdf @@ -4838,7 +4821,6 @@ Astropy objects.") (list python-asdf python-pytest python-pytest-openfiles - python-semantic-version python-setuptools-scm)) (propagated-inputs (list python-asdf-coordinates-schemas @@ -4869,7 +4851,6 @@ install an implementation package such as gwcs.") python-pytest python-pytest-doctestplus python-pyyaml - python-semantic-version python-setuptools-scm)) (propagated-inputs (list python-asdf @@ -4907,9 +4888,7 @@ default) to world coordinates.") ;; python-rad -> python-roman-datamodels -> python-crds -> python-rad #:test-flags #~(list "--ignore=tests/test_schemas.py"))) (native-inputs - (list python-pytest - python-semantic-version - python-setuptools-scm)) + (list python-pytest python-setuptools-scm)) (propagated-inputs (list python-asdf python-asdf-astropy)) (home-page "https://github.com/spacetelescope/rad") (synopsis "Roman Attribute Dictionary") @@ -5023,7 +5002,6 @@ solar physics.") python-pytest-doctestplus python-pytest-env python-pytest-xdist - python-semantic-version python-setuptools-scm)) (home-page "https://github.com/spacetelescope/roman_datamodels") (synopsis "Roman Datamodels Support") @@ -5057,8 +5035,7 @@ pipelines.") (list python-astropy python-ccdproc python-pillow - python-pytest - python-semantic-version)) + python-pytest)) (propagated-inputs (list python-bottleneck python-numpy -- cgit v1.2.3