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| author | Ricardo Wurmus <rekado@elephly.net> | 2019-03-07 11:46:16 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2019-03-18 18:24:45 +0100 |
| commit | fa5a25386620cec4b2543aae24fc9a0776aa3dca (patch) | |
| tree | 9ec1aefb67e137b96a5a7e3d7383c75b3d155fd5 | |
| parent | 4ddf067f214b83c2ab03ed52a7e9ddf6f4f6de66 (diff) | |
| download | gnu-guix-fa5a25386620cec4b2543aae24fc9a0776aa3dca.tar gnu-guix-fa5a25386620cec4b2543aae24fc9a0776aa3dca.tar.gz | |
gnu: Add java-openmpi.
* gnu/packages/mpi.scm (java-openmpi): New variable.
| -rw-r--r-- | gnu/packages/mpi.scm | 46 |
1 files changed, 46 insertions, 0 deletions
diff --git a/gnu/packages/mpi.scm b/gnu/packages/mpi.scm index 10de6dee5b..952edca66e 100644 --- a/gnu/packages/mpi.scm +++ b/gnu/packages/mpi.scm @@ -35,6 +35,7 @@ #:use-module (gnu packages) #:use-module (gnu packages fabric-management) #:use-module (gnu packages gcc) + #:use-module (gnu packages java) #:use-module (gnu packages libevent) #:use-module (gnu packages linux) #:use-module (gnu packages pciutils) @@ -265,6 +266,51 @@ software vendors, application developers and computer science researchers.") ;; See file://LICENSE (license bsd-2))) +;; TODO: javadoc files contain timestamps. +(define-public java-openmpi + (package (inherit openmpi) + (name "java-openmpi") + (inputs + `(("openmpi" ,openmpi) + ,@(package-inputs openmpi))) + (native-inputs + `(("jdk" ,openjdk11 "jdk") + ("zip" ,(@ (gnu packages compression) zip)) + ,@(package-native-inputs openmpi))) + (outputs '("out")) + (arguments + `(#:modules ((guix build gnu-build-system) + ((guix build ant-build-system) #:prefix ant:) + (guix build utils)) + #:imported-modules ((guix build ant-build-system) + (guix build syscalls) + ,@%gnu-build-system-modules) + ,@(substitute-keyword-arguments (package-arguments openmpi) + ((#:configure-flags flags) + `(cons "--enable-mpi-java" ,flags)) + ((#:make-flags flags ''()) + `(append '("-C" "ompi/mpi/java") + ,flags)) + ((#:phases phases) + `(modify-phases ,phases + ;; We could provide the location of the JDK in the configure + ;; flags, but since the configure flags are embedded in the + ;; info binaries that would leave a reference to the JDK in + ;; the "out" output. To avoid this we set JAVA_HOME. + (add-after 'unpack 'set-JAVA_HOME + (lambda* (#:key inputs #:allow-other-keys) + (setenv "JAVA_HOME" (assoc-ref inputs "jdk")) + #t)) + (add-after 'unpack 'link-with-existing-mpi-libraries + (lambda* (#:key inputs #:allow-other-keys) + (substitute* "ompi/mpi/java/c/Makefile.in" + (("\\$\\(top_builddir\\)/ompi/lib@OMPI_LIBMPI_NAME@.la") + (string-append (assoc-ref inputs "openmpi") "/lib/libmpi.la"))) + #t)) + (add-after 'install 'strip-jar-timestamps + (assoc-ref ant:%standard-phases 'strip-jar-timestamps))))))) + (synopsis "Java bindings for MPI"))) + (define-public openmpi-thread-multiple (package (inherit openmpi) |